In bold: past and present group members.


Zhang F., J. Wu, N. Sade, S. Wu, A. Egbaria, A. R. Fernie, J. Yan, F. Qin, W. Chen, Y. Brotman, M. Dai. “Genomic Basis Underlying the Metabolome-Mediated Drought Adaptation of Maize.” Genome Biol 22:1 (Dec 2021) 1-26.

Shteinberg M., R. Mishra, G. Anfoka, M. Altaleb, Y. Brotman, M. Moshelion, R. Gorovits, H. Czosnek. “Tomato Yellow Leaf Curl Virus (TYLCV) Promotes Plant Tolerance to Drought.”Cells 10:11 (Nov 2021) 2875.

Lazare S., H. Yasuor, U. Yermiyahu, A. Kuhalskaya, Y. Brotman, A. Ben-Gal, A. Dag. “It takes two: Reciprocal Scion-Rootstock Relationships Enable Salt Tolerance in ‘Hass’ Avocado.” Plant Sci 312 (Nov 2021) 111048.

Zhu F, S. Alseekh, K. Koper, H. Tong, Z. Nikoloski, T. Naake, H. Liu, J. Yan, Y. Brotman, W. Wen, H. Maeda, Y. Cheng, A. R. Fernie. “Genome-Wide Association of the Metabolic Shifts Underpinning Dark-Induced Senescence in Arabidopsis.” Plant Cell (Oct 2021) koab251.

Alseekh S., A. Aharoni, Y. Brotman, K. Contrepois, J. D’Auria, J. Ewald, J. C. Ewald, P. D. Fraser, P. Giavalisco, R. D. Hall, M. Heinemann, H. Link, J. Luo, S. Neumann, J. Nielsen, L. Perez de Souza, K. Saito, U. Sauer, F. C. Schroeder, S. Schuster, G. Siuzdak, A. Skirycz, L. W. Sumner, M. P. Snyder, H. Tang, T. Tohge, Y. Wang, W. Wen, S. Wu, G. Xu, N. Zamboni, A. R. Fernie. “Mass Spectrometry-Based Metabolomics: A Guide for Annotation, Quantification and Best Reporting Practices.” Nat Methods (Jul 2021) 18:7 747-756.

Medeiros D. B., Y. Brotman, and A. R. Fernie. “The Utility of Mmetabolomics as A Tool to Inform Maize Biology.” Plant Commun (Apr 2021).

Lazare S., D. Bechar, K. Garbowitz, A. R. Fernie, Y. Brotman, and M. Zaccai. “When Vegetation Indicates Reproduction: the Affinity between Leaf Morphology and Flowering Commitment in the Lily Meristem.” Physiol Plant (Apr 2021).

Omidbakhshfard M. A., E. M. Sokolowska, V. Di Vittori, L. P. de Souza, A. Kuhalskaya, Y. Brotman,  S. Alseekh, A. R. Fernie, and A. Skirycz. “Multi-Omics Analysis of Early Leaf Development in Arabidopsis thaliana.” Patterns 2:4 (Apr 2021) 100235.

Wu S., S. Alseekh, Y. Brotman, and A. R. Fernie. “Metabolomic Analysis of Natural Variation in Arabidopsis.” Methods Mol Biol 2200 (Mar 2021) 393-411.

Brotman Y., C. Llorente-Wiegand, G. Oyong, S. Badoni, G. Misra, R. Anacleto, S. Parween, E. Pasion, R. Tiozon, J. Anonuevo, M. deGuzman, S. Alseekh, E. Mbanjo, L. Boyd, A. R. Fernie, and N. Sreenivasulu. “The Genetics Underlying Metabolic Signatures in a Brown Rice Diversity Panel and Their Vital Role in Human Nutrition.” Plant J (Feb 2021).

Barros J. A. S., S. Magen, T. Lapidot-Cohen, L. Rosental, Y. Brotman, W. L. Araújo, and T. Avin-Wittenberg. “Autophagy Is Required for Lipid Homeostasis During Dark-Induced Senescence in Arabidopsis.” Plant Physiol 182:2 (Jan 2021) 857-869.


Sade D., N. Sade, Y. Brotman, and H. Czosnek. “Tomato Yellow Leaf Curl Virus (TYLCV)-Resistant Tomatoes Share Molecular Mechanisms Sustaining Resistance with Their Wild Progenitor Solanum habrochaites But Not With TYLCV-Susceptible Tomato.” Plant Sci 295 (Jun 2020) 110439.

Gago J., J. Estrany, L. Estes, A. R. Fernie, B. Alorda, Y. Brotman, J. Flexas, M. J. Escalona, and H. Medrano. “Nano and Micro Unmanned Aerial Vehicles (UAVs): A New Grand Challenge for Precision Agriculture?” Current Protoc Plant Biol 5:1 (Mar 2020) e20103.

Lapidot-Cohen T., L. Rosental, Y., and Brotman Y. “Liquid chromatography–mass spectrometry-based analysis for lipophilic compound profiling in plants.” Curr Protoc Plant Biol 5:2 (Jun 2020) e20109.

Treves H., B. Siemiatkowska, U. Luzarowska, O. Murik, N. Fernandez-Pozo, T. A. Moraes, A. Erban, U. Armbruster, Y. Brotman, J. Kopka, S. A. Rensing, J. Szymanski, and M. Stitt. “Multi-omics reveals mechanisms of total resistance to extreme illumination of a desert alga.” Nat Plants 6:8 (Aug 2020) 1031-1043.

Correa S.M., S. Alseekh, L. Atehortúa, Y. Brotman, R. Ríos‐Estepa, A. R. Fernie, and Z. Nikoloski. “Model‐assisted identification of metabolic engineering strategies for Jatropha curcas lipid pathways.” Plant J 104:1 (Sep 2020) 76-95.

Correa S. M., A. R. Fernie, Z. Nikoloski, and Y. Brotman. “Towards model-driven characterization and manipulation of plant lipid metabolism.” Prog Lipid Res 80:101051 (Nov 2020).

Watanabe M., D. Walther, Y. Ueda, K. Kondo, S. Ishikawa, T. Tohge, A. Burgos, Y. Brotman, A. R. Fernie, R. Hoefgen, and M. Wissuwa. “Metabolomic markers and physiological adaptations for high phosphate utilization efficiency in rice.” Plant Cell Environ 43:9 (Sep 2020) 2066-2079.

Kuhalskaya A., M. W. Ahchige, L. P.  de Souza, J. Vallarino, Y. Brotman, and S. Alseekh. “Network analysis provides insight into tomato lipid metabolism.” Metabolites 10:4 (Apr 2020) 152.

Wu S., S. Alseekh, Y. Brotman, and A. R. Fernie. “Metabolomic Analysis of Natural Variation in Arabidopsis.” In: Sanchez-Serrano J.J., Salinas J. (eds) Arabidopsis Protocols. (2020) Methods in Molecular Biology, vol 2200. Humana, New York, NY.

de Souza L. P., S. Alseekh, Y. Brotman, and A. R. Fernie. “Network-based strategies in metabolomics data analysis and interpretation: from molecular networking to biological interpretation.” Expert Rev Proteomics 17:4 (Apr 2020) 243-255.

Toubiana D, N. Sade, L. Liu, M. D. M. Rubio Wilhelmi, Y. Brotman, U. Luzarowska, J. Vogel, and E. Blumwald. “Correlation-based network analysis combined with machine learning techniques highlight the role of the GABA shunt in Brachypodium sylvaticum freezing tolerance.” Sci Rep 10:1 (Mar 2020) 4489.

Wan H., H. Liu, J. Zhang, Y. Lyu, Z. Li, Y. He, X. Zhang, X. Deng, Y. Brotman, A. R. Fernie, Y. Cheng, and W. Wen. “Lipidomic and transcriptomic analysis reveals re-allocation of carbon flux from cuticular wax into plastid membrane lipids in a glossy ‘Newhall’ navel orange mutant.” Hortic Res 7:41 (Apr 2020).

Clemente-Moreno, M.J., N. Omranian, P. L. Sáez, C. M. Figueroa, N. Del-Saz, M. E. Freudenberg, M. Elso, L. Poblete, I. Orf, A. Cuadros-Inostroza, L. A. Cavieres, L. Bravo, A. R. Fernie, M. Ribas-Carbo, J. Flexas, Z. Nikoloski, Y. Brotman, and J. Gago. “Low temperature tolerance of the Antarctic species Deschampsia antarctica: a complex metabolic response associated with nutrient remobilization.” Plant Cell Environ 43:6 (Jun 2020) 1376-1393.

Omidbakhshfard, M.A., N. Sujeeth, S. Gupta, N. Omranian, K. J. Guinan, Y. Brotman, Z. Nikoloski, A. R. Fernie, B. Mueller-Roeber, and T. S. Gechev. “A biostimulant obtained from the seaweed Ascophyllum nodosum protects Arabidopsis thaliana from severe oxidative stress.” Int J Mol Sci 21:2 (Jan 2020) 474.

Parween, S., J. J. Anonuevo, V. Butardo, G. Misra, R. Anacleto, C. Llorente, O. Kosik, M. V. Romero, E. H. Bandonill, M. S. Mendioro, A. Lovegrove, A. R. Fernie, Y. Brotman, and N. Sreenivasulu. “Balancing the double-edged sword effect of increased resistant starch content and its impact on rice texture: Its genetics and molecular physiological mechanisms.” Plant Biotechnol J 18:8 (Aug 2020) 1763-1777.

Clemente-Moreno, M.J., N. Omranian, P. Sáez, C. M. Figueroa, N. Del-Saz, M. Elso, L. Poblete, I. Orf, A. Cuadros-Inostroza, L. Cavieres, L. Bravo, A. R. Fernie, M. Ribas-Carbó, J. Flexas, Z. Nikoloski, Y. Brotman, and Gago J. “Cytochrome respiration pathway and sulphur metabolism sustain stress tolerance to low temperature in the Antarctic species Colobanthus quitensis.” New Phytol 225:2 (Jan 2020) 754-768.

de Souza, L.P., K. Garbowicz, Y. Brotman, T. Tohge, and A. R. Fernie. “The acetate pathway supports flavonoid and lipid biosynthesis in Arabidopsis” Plant Physiol 182:2 (Feb 2020) 857-869.


Mur, L.A.J., A. Kumari, Y. Brotman, J. Zeier, J. Mandon, S. Cristescu, F. Harren, W. Kaiser, A. R. Fernie, and K. J. Gupta. “Nitrite and nitric oxide are important in the adjustment of primary metabolism during the hypersensitive response in tobacco.” J Exp Bot 70:17 (Aug 2019) 4571-4582.

Li, K., W. Wen, S. Alseekh, X. Yang, H. Guo, W. Li, L. Wang, Q. Pan, W. Zhan, J. Liu, Y. Li, X. Wu, Y. Brotman, L. Willmitzer, J. Li, A. R. Fernie, and J. Yan. “Large-scale metabolite QTL analysis provides new insights for high-quality maize improvement.” Plant J 99:2 (Mar 2019) 216-230.

Liang, Y., F. Kong, I. Torres Romero, A. Burlacot, S. Cuiné, B. Legeret, E. Billon, Y. Brotman, S. Alseekh, A. R. Fernie, F. Beisson, G. Peltier, and Y. Li-Beisson. “Branched-chain amino acid catabolism impacts triacylglycerol homeostasis in Chlamydomonas reinhardtii.” Plant Physiol 179:4 (Feb 2019) 1502-1514.


Garbowicz, K., Z. Liu, S. Alseekh, D. Tieman, M. Taylor, A. Kuhalskaya, I. Ofner, D. Zamir, H. Klee, A. R. Fernie, and Brotman, Y. “Quantitative trait loci analysis identifies a prominent gene involved in the production of fatty acid-derived flavor volatiles in tomato.” Mol Plant 11:9 (May 2018): 1147-1165.

Watanabe, M., F. Netzer, T. Tohge, I. Orf, Y. Brotman, D. Dubbert, A. R. Fernie, H. Rennenberg, R. Hoefgen, and C. Herschbach. “Metabolome and Lipidome Profiles of Populus × canescens Twig Tissues During Annual Growth Show Phospholipid-Linked Storage and Mobilization of C, N, and S.” Front Plant Sci 9:1292 (Sep 2018).

Llorente, C., Y. Brotman, A. R. Fernie, and R. P. Cuevas. “Using multivariate analyses to compare rice metabolic profiles.” Rice Grain Quality (2018), Humana Press, Springer, Berlin.

Llorente, C., R. Jimenez, Y. Brotman, A. R. Fernie, and N. Sreenivasulu. “Rice grain quality benchmarking through profiling of volatiles and metabolites in grains using gas chromatography mass spectrometry.” Rice Grain Quality (2018), Humana Press, Springer, Berlin, 187-199

de Abreu, E. Lima F., K. Li, W. Wen, J. Yan, Z. Nikoloski, L. Willmitzer, and Y. Brotman. “Unraveling Lipid Metabolism in Maize with Time-Resolved Multi-Omics Data.” Plant J 93:6 (Mar 2018): 1102-15.

Wu, S., T. Tohge, A. Cuadros-Inostroza, H. Tong, H. Tenenboim, R. Kooke, M. Meret, J. B. Keurentjes, Z. Nikoloski, A. R. Fernie, L. Willmitzer, and Y. Brotman. “Mapping the Arabidopsis Metabolic Landscape by Untargeted Metabolomics at Different Environmental Conditions.” Mol Plant 11:1 (Jan 2018): 118-34.

Lazare, S., A. Burgos, Y. Brotman, and M. Zaccai. “The Metabolic (under)Groundwork of the Lily Bulb toward Sprouting.” Physiol Plant 163:4 (Aug 2018): 436-49.

Lazare S., D. Bechar, A.R. Fernie, Y. Brotman, and M. Zaccai, M. “The proof is in the bulb: glycerol influences key stages of lily development.” Plant J (2018)

Durgud, M., S. Gupta, I. Ivanov, M. A. Omidbakhshfard, M. Benina, S. Alseekh, N. Staykov, M. Hauenstein, P. P. Dijkwel, S. Hortensteiner, V. Toneva, Y. Brotman, A. R. Fernie, B. Mueller-Roeber, and T. S. Gechev. “Molecular Mechanisms Preventing Senescence in Response to Prolonged Darkness in a Desiccation-Tolerant Plant.” Plant Physiol 177:3 (Jul 2018): 1319-38.

Kong, F., A. Burlacot, Y. Liang, B. Legeret, S. Alseekh, Y. Brotman, A. R. Fernie, A. Krieger-Liszkay, F. Beisson, G. Peltier, and Y. Li-Beisson. “Interorganelle Communication: Peroxisomal Malate Dehydrogenase 2 Connects Lipid Catabolism to Photosynthesis through Redox Coupling in Chlamydomonas.” Plant Cell  (Jul 2018).

Shnaider, Y., D. Mitra, G. Miller, A. Baniel, T. Doniger, A. Kuhalskaya, F. Scossa, A. R. Fernie, Y. Brotman, and R. Perl-Treves. “Cucumber Ovaries Inhibited by Dominant Fruit Express a Dynamic Developmental Program, Distinct from Either Senescence-Determined or Fruit-Setting Ovaries.” Plant J  (Jul 2018).

Alseekh, S., S. Wu, Y. Brotman, and A. R. Fernie. “Guidelines for Sample Normalization to Minimize Batch Variation for Large-Scale Metabolic Profiling of Plant Natural Genetic Variance.” Methods Mol Biol 1778 (2018): 33-46.

Bustamante, C. A., Y. Brotman, L. L. Monti, J. Gabilondo, C. O. Budde, M. V. Lara, A. R. Fernie, and M. F. Drincovich. “Differential Lipidome Remodeling During Postharvest of Peach Varieties with Different Susceptibility to Chilling Injury.” Physiol Plant 163:1 (May 2018): 2-17.

Wen, W., M. Jin, K. Li, H. Liu, Y. Xiao, M. Zhao, S. Alseekh, W. Li, E. Lima F. de Abreu, Y. Brotman, L. Willmitzer, A. R. Fernie, and J. Yan. “An Integrated Multi-Layered Analysis of the Metabolic Networks of Different Tissues Uncovers Key Genetic Components of Primary Metabolism in Maize.” Plant J 93:6 (Mar 2018): 1116-28.

Sade, N., M. Del Mar Rubio Wilhelmi, X. Ke, Y. Brotman, M. Wright, I. Khan, W. De Souza, E. Bassil, C. M. Tobias, R. Thilmony, J. P. Vogel, and E. Blumwald. “Salt Tolerance of Two Perennial Grass Brachypodium Sylvaticum Accessions.” Plant Mol Biol 96:3 (Feb 2018): 305-14.


Alseekh, S., H. Tong, F. Scossa, Y. Brotman, F. Vigroux, T. Tohge, I. Ofner, D. Zamir, Z. Nikoloski, and A. R. Fernie. “Canalization of Tomato Fruit Metabolism.” Plant Cell 29:11 (Nov 2017): 2753-65.

Jin, M., X. Zhang, M. Zhao, M. Deng, Y. Du, Y. Zhou, S. Wang, T. Tohge, A. R. Fernie, L. Willmitzer, Y. Brotman, J. Yan, and W. Wen. “Integrated Genomics-Based Mapping Reveals the Genetics Underlying Maize Flavonoid Biosynthesis.” BMC Plant Biol 17:1 (Jan 2017): 17.


Tenenboim, H., A. Burgos, L. Willmitzer, and Y. Brotman. “Using Lipidomics for Expanding the Knowledge on Lipid Metabolism in Plants.” Biochimie 130 (Nov 2016): 91-96.

Wu, S., S. Alseekh, A. Cuadros-Inostroza, C. M. Fusari, M. Mutwil, R. Kooke, J. B. Keurentjes, A. R. Fernie, L. Willmitzer, and Y. Brotman. “Combined Use of Genome-Wide Association Data and Correlation Networks Unravels Key Regulators of Primary Metabolism in Arabidopsis Thaliana.” PLoS Genet 12:10 (Oct 2016): e1006363.

Tenenboim, H. and Y. Brotman. “Omic Relief for the Biotically Stressed: Metabolomics of Plant Biotic Interactions.” Trends Plant Sci 21:9 (Sep 2016): 781-91.

Allu, A. D., Y. Brotman, G. P. Xue, and S. Balazadeh. “Transcription Factor Anac032 Modulates Ja/Sa Signalling in Response to Pseudomonas Syringae Infection.” EMBO Rep 17:11 (Nov 2016): 1578-89.

Wen, W., Y. Brotman, L. Willmitzer, J. Yan, and A. R. Fernie. “Broadening Our Portfolio in the Genetic Improvement of Maize Chemical Composition.” Trends Genet 32:8 (Aug 2016): 459-69.

Liu, Z., S. Alseekh, Y. Brotman, Y. Zheng, Z. Fei, D. M. Tieman, J. J. Giovannoni, A. R. Fernie, and H. J. Klee. “Identification of a Solanum Pennellii Chromosome 4 Fruit Flavor and Nutritional Quality-Associated Metabolite Qtl.” Front Plant Sci 7 (2016): 1671.

Scossa, F., Y. Brotman, E. Lima F. de Abreu, L. Willmitzer, Z. Nikoloski, T. Tohge, and A. R. Fernie. “Genomics-Based Strategies for the Use of Natural Variation in the Improvement of Crop Metabolism.” Plant Sci 242 (Jan 2016): 47-64.


Bromke, M. A., A. Hochmuth, T. Tohge, A. R. Fernie, P. Giavalisco, A. Burgos, L. Willmitzer, and Y. Brotman. “Liquid Chromatography High-Resolution Mass Spectrometry for Fatty Acid Profiling.” Plant J 81:3 (Feb 2015): 529-36.

Sade, D., O. Shriki, A. Cuadros-Inostroza, T. Tohge, Y. Semel, Y. Haviv, L. Willmitzer, A.R. Fernie, H. Czosnek, H., and Y. Brotman. “Comparative metabolomics and transcriptomics of plant response to Tomato yellow leaf curl virus infection in resistant and susceptible tomato cultivars.” Metabolomics 11 (2015) 81-97.


Tenenboim, H., J. Smirnova, L. Willmitzer, M. Steup, and Y. Brotman. “Vmp1-Deficient Chlamydomonas Exhibits Severely Aberrant Cell Morphology and Disrupted Cytokinesis.” BMC Plant Biol 14 (May 2014): 121.

Sade, D., N. Sade, O. Shriki, S. Lerner, A. Gebremedhin, A. Karavani, Y. Brotman, S. Osorio, A. R. Fernie, L. Willmitzer, H. Czosnek, and M. Moshelion. “Water Balance, Hormone Homeostasis, and Sugar Signaling Are All Involved in Tomato Resistance to Tomato Yellow Leaf Curl Virus.” Plant Physiol 165:4 (Aug 2014): 1684-97.

Gupta, K. J., L. A. Mur, and Y. Brotman. “Trichoderma Asperelloides Suppresses Nitric Oxide Generation Elicited by Fusarium Oxysporum in Arabidopsis Roots.” Mol Plant Microbe Interact 27:4 (Apr 2014): 307-14.

Gupta, K.J., Y. Brotman, and L.A. Mur. “Localisation and quantification of reactive oxygen species and nitric oxide in Arabidopsis roots in response to fungal infection.” Bio-Protocol 4:19 (2014).

Szymanski, J., Y. Brotman, L. Willmitzer, and A. Cuadros-Inostroza. “Linking Gene Expression and Membrane Lipid Composition of Arabidopsis.” Plant Cell 26:3 (Mar 2014): 915-28.


Sade, D., Y. Brotman, A. Eybishtz, A. Cuadros-Inostroza, A. R. Fernie, L. Willmitzer, and H. Czosnek. “Involvement of the Hexose Transporter Gene Leht1 and of Sugars in Resistance of Tomato to Tomato Yellow Leaf Curl Virus.” Mol Plant 6:5 (Sep 2013): 1707-10.

Riedelsheimer, C., Y. Brotman, M. Meret, A. E. Melchinger, and L. Willmitzer. “The Maize Leaf Lipidome Shows Multilevel Genetic Control and High Predictive Value for Agronomic Traits.” Sci Rep 3 (2013): 2479.

Brotman, Y., U. Landau, A. Cuadros-Inostroza, T. Tohge, A. R. Fernie, I. Chet, A. Viterbo, and L. Willmitzer. “Trichoderma-Plant Root Colonization: Escaping Early Plant Defense Responses and Activation of the Antioxidant Machinery for Saline Stress Tolerance.” PLoS Pathog 9:3 (Mar 2013): e1003221.

Tahir, J., M. Watanabe, H. C. Jing, D. A. Hunter, T. Tohge, A. Nunes-Nesi, Y. Brotman, A. R. Fernie, R. Hoefgen, and P. P. Dijkwel. “Activation of R-Mediated Innate Immunity and Disease Susceptibility Is Affected by Mutations in a Cytosolic O-Acetylserine (Thiol) Lyase in Arabidopsis.” Plant J 73:1 (Jan 2013): 118-30.

Brotman, Y., M. Normantovich, Z. Goldenberg, Z. Zvirin, I. Kovalski, N. Stovbun, T. Doniger, A. M. Bolger, C. Troadec, A. Bendahmane, R. Cohen, N. Katzir, M. Pitrat, C. Dogimont, and R. Perl-Treves. “Dual Resistance of Melon to Fusarium Oxysporum Races 0 and 2 and to Papaya Ring-Spot Virus Is Controlled by a Pair of Head-to-Head-Oriented Nb-Lrr Genes of Unusual Architecture.” Mol Plant 6:1 (Jan 2013): 235-8.

Gupta, K. J., Y. Brotman, S. Segu, T. Zeier, J. Zeier, S. T. Persijn, S. M. Cristescu, F. J. Harren, H. Bauwe, A. R. Fernie, W. M. Kaiser, and L. A. Mur. “The Form of Nitrogen Nutrition Affects Resistance against Pseudomonas Syringae Pv. Phaseolicola in Tobacco.” J Exp Bot 64:2 (Jan 2013): 553-68.

Brotman, Y. “The use of metabolomic approaches to study Trichoderma–plant interactions.” Trichoderma: Biology and Applications 209 (2013).


Brotman, Y., U. Landau, S. Pnini, J. Lisec, S. Balazadeh, B. Mueller-Roeber, A. Zilberstein, L. Willmitzer, I. Chet, and A. Viterbo. “The Lysm Receptor-Like Kinase Lysm Rlk1 Is Required to Activate Defense and Abiotic-Stress Responses Induced by Overexpression of Fungal Chitinases in Arabidopsis Plants.” Mol Plant 5:5 (Sep 2012): 1113-24.

Brotman, Y., J. Lisec, M. Meret, I. Chet, L. Willmitzer, and A. Viterbo.”Transcript and Metabolite Analysis of the Trichoderma-Induced Systemic Resistance Response to Pseudomonas Syringae in Arabidopsis Thaliana.” Microbiology 158:1 (Jan 2012): 139-46.

Gupta, K. J., J. K. Shah, Y. Brotman, K. Jahnke, L. Willmitzer, W. M. Kaiser, H. Bauwe, and A. U. Igamberdiev. “Inhibition of Aconitase by Nitric Oxide Leads to Induction of the Alternative Oxidase and to a Shift of Metabolism Towards Biosynthesis of Amino Acids.” J Exp Bot 634 (Feb 2012): 1773-84.

Moshe, A., J. Pfannstiel, Y. Brotman, K. Mikhail, H. Czosnek, and R. Gorovitzs. “Stress responses to Tomato yellow leaf curl virus (TYLCV) infection of resistant and susceptible tomato plants are different.” Metabolomics S:1 (2012)


Brotman, Y., D. Riewe, J. Lisec, R. C. Meyer, L. Willmitzer, and T. Altmann. “Identification of Enzymatic and Regulatory Genes of Plant Metabolism through Qtl Analysis in Arabidopsis.” J Plant Physiol 168:2 (Aug 2011): 1387-94.


Brotman, Y., J. G. Kapuganti, and A. Viterbo. “Trichoderma.” Curr Biol 20:9 (May 2010): R390-1.

Zvirin, T., R. Herman, Y. Brotman, Y. Denisov, E. Belausov, S. Freeman, and R. Perl‐Treves. “Differential colonization and defence responses of resistant and susceptible melon lines infected by Fusarium oxysporum race 1·2″, Plant Pathol 59 (2010) 576-585.


Brotman, Y., A. Makovitzki, Y. Shai, I. Chet, and A. Viterbo. “Synthetic Ultrashort Cationic Lipopeptides Induce Systemic Plant Defense Responses against Bacterial and Fungal Pathogens.” Appl Environ Microbiol 75:16 (Aug 2009): 5373-9.

Viterbo, A., Y. Brotman, E. Briff, I. Chet, Y. Elad, M. Maurhofer, C. Keel, C. Gessler, and B. Duffy. “Involvement of swollenin, an expansin-like protein from Trichoderma, in mycoparasitism.” Joint with COST Action 873, Working Group 4 43 (2009): 101-104.


Brotman, Y., E. Briff, A. Viterbo, and I. Chet. “Role of Swollenin, an Expansin-Like Protein from Trichoderma, in Plant Root Colonization.” Plant Physiol 147:2 (Jun 2008): 779-89.


Viterbo, A., A. Wiest, Y. Brotman, I. Chet, and C. Kenerley. “The 18mer Peptaibols from Trichoderma Virens Elicit Plant Defence Responses.” Mol Plant Pathol 8:6 (Nov 2007): 737-46.

Makovitzki, A., A. Viterbo, Y. Brotman, I. Chet, and Y. Shai. “Inhibition of Fungal and Bacterial Plant Pathogens in Vitro and in Planta with Ultrashort Cationic Lipopeptides.” Appl Environ Microbiol 73:20 (Oct 2007): 6629-36.


Brotman, Y., I. Kovalski, C. Dogimont, M. Pitrat, V. Portnoy, N. Katzir, and R. Perl-Treves. “Molecular Markers Linked to Papaya Ring Spot Virus Resistance and Fusarium Race 2 Resistance in Melon.” Theor Appl Genet 1102 (Jan 2005): 337-45.


Park, Y., N. Katzir, Y. Brotman, J. King, F. Bertrand, and M. Havey. “Comparative Mapping of Zymv Resistances in Cucumber (Cucumis Sativus L.) and Melon (Cucumis Melo L.).” Theor Appl Genet 109:4 (Aug 2004): 707-12.

Brotman, Y., I Kovalski, C. Dogimont, M. Pitrat, N. Katzir, R. Perl-Treves, A. Lebeda, and H. Paris. “Molecular mapping of the melon Fom-1/Prv locus.” Progress in cucurbit genetics and breeding research. Proceedings of Cucurbitaceae (2004): 485-489.


Silberstein, L., I. Kovalski, Y. Brotman, C. Perin, C. Dogimont, M. Pitrat, J. Klingler, G. Thompson, V. Portnoy, N. Katzir, and R. Perl-Treves. “Linkage Map of Cucumis Melo Including Phenotypic Traits and Sequence-Characterized Genes.” Genome 46:5 (Oct 2003): 761-73.


Brotman, Y., L. Silberstein, I. Kovalski, C. Perin, C. Dogimont, M. Pitrat, J. Klingler, A. Thompson, and R. Perl-Treves. “Resistance Gene Homologues in Melon Are Linked to Genetic Loci Conferring Disease and Pest Resistance.” Theor Appl Genet 104:6-7 (May 2002): 1055-63.


Brotman, Y., L. Silberstein, I. Kovalski, J. Klingler, G. Thompson, N. Katzir, and R. Perl-Treves. “Linkage groups of Cucumis melo, including resistance gene homologues and known genes.” VII Eucarpia Meeting on Cucurbit Genetics and Breeding 510 (2000): 441-448.